Day 2 - AIRR Community 2017

Monday, December 4, 2017 ~ NIAID’s Fishers Lane Facility

Scientific Presentations: Sessions 1 – 3

See below for links to Webinars and presentation materials

8:30 – 8:40

Introduction to the Day’s Agenda ~ Room 1D13

Session 1: Germline Gene Inference Tools

Moderator’s Introduction:

   Andrew Collins, University of New South Wales

8:45 – 9:05

 

9:05 – 9:25

 

9:25 – 9:35

 Presentation 1 – TIgGER for IGHV Gene Inference (Presentation)

   Steve Kleinstein, Yale University

Presentation 2 - IgDiscover for IGHV Gene Inference

   Martin Corcoran, Karolinska Institute

Shared Q&A

9:35 – 10:00

 

10:00 – 10:10

 

10:10 – 10:30

 Presentation 3 – Evaluation and Validation of Germline Gene Inference

   Mats Ohlin, Lund University

Q&A

 

Panel Discussion: Validation & Comparison of Inference Tools

 10:30 – 10:45

 Break

 10:45 – 10:55  Session 2: IGH Genomic Haplotypes

Moderator’s Introduction:

   Marie-Paule Lefranc, IMGT, University of Montpellier

10:55 – 11:20

 

11:20 – 11:30

 Presentation 1 – Characterizing Germline Immunoglobulin Diversity in Human and Mouse

   Corey Watson, University of Louisville Medical School

Q&A

11:30– 11:55

 

 

11:55 – 12:05

 Presentation 2 – Role of Novel Regulatory Elements in the Formation of the Ig-k Repertoire

   Ann Feeney, The Scripps Research Institute

Q&A

12:05 – 12:30

 

12:30 – 12:40

 

12:40 – 1:00

 Presentation 3 – Immunogenomics of the Rhesus macaque, an animal model for HIV vaccine development

   Akshaya Ramesh, University of California, San Francisco   Q&A

 

AIRR Community Discussion

Discussion Leaders: Marie-Paule Lefranc & Corey Watson

   IGH Haplotype and Germline Gene Nomenclatures

1:00 – 1:45   Boxed Lunches & Poster Session I ~ LD10 Lower Level
1:45 – 2:15

Minimal Standards Implementation Demos

   Steven Kleinstein, Nina Prak, Florian Rubelt, Christian Busse, & Syed Ahmad Chan Bukhari

2:15 – 2:25

Session 3: IP Issues in Data Sharing across Shared Repositories

Moderator’s Introduction:

   Tania Bubela, Simon Fraser University

2:45 – 3:05

Presentation 1 - Learnings from Publicly Available Immune Receptor Datasets

   Harlan Robins, CEO, Adaptive Biotechnologies (Presentation)

2:45 – 3:05

Presentation 2 - On the Human Immunome Project

   Jim Crowe, Vanderbilt University

3:05 – 3:25 Break
3:25 – 3:45

Presentation 3 - Intellectual Property Law

   Jacob Sherkow, New York Law School

4:30 – 5:00

Panel – IP Issues in Data Sharing

   Harlan Robins, Jim Crowe & Jacob Sherkow

4:30 – 5:00

Common Repository WG: Resolving IP and Protected Sequences

Discussion and Community Vote

   Lindsay Cowell & Corey Watson

5:00 

End of Day at NIAID’s Fishers Lane Facility ~

Attendees return to Washington DC/Rockville Hilton Hotel

5:30 – 7:45

 

 

5:30 – 6:30

6:30 – 7:00

 

7:00 – 7:45

Reception and Tool Demos at the Washington DC/Rockville Hilton Hotel

Snacks provided ~ cash bar ~ Eisenhower Room

No government funds will be used for food and drinks

 

5 minute Tool Demonstrations

Panel on validation and improvement of AIRR analysis tools

 

Face-to-face tool demonstrations by teams

  

NIH Webinar Session Monday December 4, 2017 morning: Germline Gene Inference

 

 
 
 

NIH Webinar Session Monday December 4 2017 late morning: IGH Haplotypes & afternoon: Working Group Reports and IP Issues in Data Sharing